Transcriptome and Genome Analyses Applied to Aquaculture Research

doi:10.3390/books978-3-0365-5921-6

dc.contributor.editor	Pereiro, Patricia
dc.date.accessioned	2022-12-06T16:12:03Z
dc.date.available	2022-12-06T16:12:03Z
dc.date.issued	2022
dc.identifier	ONIX_20221206_9783036559223_88
dc.identifier.uri	https://directory.doabooks.org/handle/20.500.12854/94565
dc.description.abstract	Aquaculture is an important economic activity for food production all around the world that has experienced an exponential growth during the last few decades. However, several weaknesses and bottlenecks still need to be addressed in order to improve the aquaculture productive system. The recent fast development of the omics technologies has provided scientists with meaningful tools to elucidate the molecular basis of their research interests. This reprint compiles different works about the use of transcriptomics and genomics technologies in different aspects of the aquaculture research, such as immunity, stress response, development, sexual dimorphism, among others, in a variety of fish and shellfish, and even in turtles. Different transcriptome (mRNAs and non-coding RNAs (ncRNAs)), genome (Single Nucleotide Polymorphisms (SNPs)), and metatranscriptome analyses were conducted to unravel those different aspects of interest.
dc.language	English
dc.subject.classification	thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general	en_US
dc.subject.classification	thema EDItEUR::P Mathematics and Science::PS Biology, life sciences	en_US
dc.subject.classification	thema EDItEUR::K Economics, Finance, Business and Management::KN Industry and industrial studies::KNA Agribusiness and primary industries::KNAF Fisheries and related industries	en_US
dc.subject.other	RNA-Seq
dc.subject.other	lncRNAs
dc.subject.other	Dicentrarchus labrax
dc.subject.other	viral infection
dc.subject.other	nodavirus
dc.subject.other	immune response
dc.subject.other	fish
dc.subject.other	T lymphocytes
dc.subject.other	infection
dc.subject.other	malnutrition
dc.subject.other	inflammation
dc.subject.other	aquaculture
dc.subject.other	histopathology
dc.subject.other	immunohistochemistry
dc.subject.other	enteromyxosis
dc.subject.other	Philasterides dicentrarchi
dc.subject.other	turbot
dc.subject.other	transcriptomics
dc.subject.other	Chinese mitten crab
dc.subject.other	Eriocheir sinensis
dc.subject.other	transportome
dc.subject.other	transporters
dc.subject.other	salinity
dc.subject.other	osmoregulation
dc.subject.other	transcriptome
dc.subject.other	meta-analysis
dc.subject.other	gills
dc.subject.other	short pentraxins
dc.subject.other	c-reactive protein
dc.subject.other	zebrafish
dc.subject.other	transcript expression
dc.subject.other	antiviral
dc.subject.other	SVCV
dc.subject.other	rag1 mutants
dc.subject.other	skin
dc.subject.other	mucosal immunity
dc.subject.other	hypoxia
dc.subject.other	hypo-metabolic state
dc.subject.other	growth
dc.subject.other	swimming performance
dc.subject.other	metabolic landmarks
dc.subject.other	muscle transcriptome
dc.subject.other	glycolysis
dc.subject.other	lipid metabolism
dc.subject.other	protein turnover
dc.subject.other	gilthead sea bream
dc.subject.other	hepatopancreas necrosis disease
dc.subject.other	metatranscriptomics sequencing
dc.subject.other	hepatopancreatic flora
dc.subject.other	teleost
dc.subject.other	B cells
dc.subject.other	single cell transcriptomics
dc.subject.other	immunoglobulins
dc.subject.other	immune markers
dc.subject.other	transcription factors
dc.subject.other	long non-coding RNAs
dc.subject.other	hepatic transcript expression
dc.subject.other	salmon
dc.subject.other	microarray
dc.subject.other	omega-6/omega-3 ratio
dc.subject.other	nutrigenomics
dc.subject.other	fatty acids
dc.subject.other	liver
dc.subject.other	muscle
dc.subject.other	Misgurnus anguillicaudatus
dc.subject.other	sexual size dimorphism
dc.subject.other	polyploid size dimorphism
dc.subject.other	comparative transcriptome
dc.subject.other	gene expression
dc.subject.other	edible red sea urchin
dc.subject.other	Loxechinus albus
dc.subject.other	RNA-seq
dc.subject.other	reference transcriptome
dc.subject.other	Chinese soft-shelled turtle
dc.subject.other	Aeromonas hydrophila
dc.subject.other	hemorrhagic sepsis
dc.subject.other	molecular immunopathogenesis
dc.subject.other	tripartite motif proteins
dc.subject.other	B30.2 domain
dc.subject.other	antiviral immunity
dc.subject.other	Ctenopharyngodon idella
dc.subject.other	grass carp reovirus
dc.subject.other	metamorphosis
dc.subject.other	brain
dc.subject.other	RNA
dc.subject.other	sequencing
dc.subject.other	intermuscular bone
dc.subject.other	development
dc.subject.other	Megalobrama amblycephala
dc.subject.other	Oreochromis niloticus
dc.subject.other	histological structure
dc.subject.other	Atlantic salmon
dc.subject.other	smoltification
dc.subject.other	genome
dc.subject.other	mRNAs
dc.subject.other	miRNAs
dc.subject.other	sox family genes
dc.subject.other	Pelodiscus sinensis
dc.subject.other	estradiol
dc.subject.other	pseudo-female
dc.subject.other	sex-related
dc.subject.other	heterosis
dc.subject.other	heterobeltiosis
dc.subject.other	environment
dc.subject.other	transgressive genes
dc.subject.other	conserved miRNA
dc.subject.other	high-throughput sequencing
dc.subject.other	lumpfish
dc.subject.other	novel miRNA
dc.subject.other	RT-qPCR
dc.subject.other	heat shock protein
dc.subject.other	co-chaperon network
dc.subject.other	salinity-alkalinity adaptation
dc.subject.other	molecular evolution
dc.subject.other	Lateolabrax maculatus
dc.subject.other	genomics
dc.subject.other	stress response
dc.subject.other	HPI-axis
dc.subject.other	neuroendocrine-immune interaction
dc.subject.other	common carp
dc.subject.other	poly-unsaturated fatty acid
dc.subject.other	fatty acid elongase
dc.subject.other	association study
dc.subject.other	genomic selection
dc.subject.other	bulked segregant analysis
dc.subject.other	SNP
dc.subject.other	association analysis
dc.subject.other	joint effect
dc.subject.other	seawater adaptation
dc.subject.other	microRNAs
dc.subject.other	small-RNA sequencing
dc.subject.other	microarray transcriptome
dc.subject.other	European seabass
dc.subject.other	chronic inflammation
dc.subject.other	opioid receptors
dc.subject.other	immune status
dc.subject.other	whole-transcriptome sequencing
dc.subject.other	sex differentiation
dc.subject.other	non-coding RNAs
dc.subject.other	ceRNA
dc.subject.other	red cusk-eel
dc.subject.other	thermal stress
dc.subject.other	liver transcriptome
dc.subject.other	oxidative damage
dc.subject.other	protein folding
dc.subject.other	hepatic enzymes
dc.subject.other	n/a
dc.title	Transcriptome and Genome Analyses Applied to Aquaculture Research
dc.type	book
oapen.identifier.doi	10.3390/books978-3-0365-5921-6
oapen.relation.isPublishedBy	46cabcaa-dd94-4bfe-87b4-55023c1b36d0
oapen.relation.isbn	9783036559223
oapen.relation.isbn	9783036559216
oapen.pages	554
oapen.place.publication	Basel

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